高级检索
当前位置: 首页 > 详情页

Prognostic Modeling of Lung Adenocarcinoma Based on Hypoxia and Ferroptosis-Related Genes

文献详情

资源类型:
Pubmed体系:
机构: [1]Thoracic Surgery, Yan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming 650000, Yunnan Province, China. [2]Key Laboratory of Tumor Immunological Prevention and Treatment of Yunnan Province, Yan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming 650000, Yunnan Province, China. [3]Guizhou Center for Disease Control and Prevention, Guiyang, Guizhou Province 550001, China. [4]The First Clinical College of Xinxiang Medical University, Xinxiang, Henan Province 453003, China.
出处:
ISSN:

摘要:
It is well known that hypoxia and ferroptosis are intimately connected with tumor development. The purpose of this investigation was to identify whether they have a prognostic signature. To this end, genes related to hypoxia and ferroptosis scores were investigated using bioinformatics analysis to stratify the risk of lung adenocarcinoma.Hypoxia and ferroptosis scores were estimated using The Cancer Genome Atlas (TCGA) database-derived cohort transcriptome profiles via the single sample gene set enrichment analysis (ssGSEA) algorithm. The candidate genes associated with hypoxia and ferroptosis scores were identified using weighted correlation network analysis (WGCNA) and differential expression analysis. The prognostic genes in this study were discovered using the Cox regression (CR) model in conjunction with the LASSO method, which was then utilized to create a prognostic signature. The efficacy, accuracy, and clinical value of the prognostic model were evaluated using an independent validation cohort, Receiver Operator Characteristic (ROC) curve, and nomogram. The analysis of function and immune cell infiltration was also carried out.Here, we appraised 152 candidate genes expressed not the same, which were related to hypoxia and ferroptosis for prognostic modeling in The Cancer Genome Atlas Lung Adenocarcinoma (TCGA-LUAD) cohort, and these genes were further validated in the GSE31210 cohort. We found that the 14-gene-based prognostic model, utilizing MAPK4, TNS4, WFDC2, FSTL3, ITGA2, KLK11, PHLDB2, VGLL3, SNX30, KCNQ3, SMAD9, ANGPTL4, LAMA3, and STK32A, performed well in predicting the prognosis in lung adenocarcinoma. ROC and nomogram analyses showed that risk scores based on prognostic signatures provided desirable predictive accuracy and clinical utility. Moreover, gene set variance analysis showed differential enrichment of 33 hallmark gene sets between different risk groups. Additionally, our results indicated that a higher risk score will lead to more fibroblasts and activated CD4 T  cells but fewer myeloid dendritic cells, endothelial cells, eosinophils, immature dendritic cells, and neutrophils.Our research found a 14-gene signature and established a nomogram that accurately predicted the prognosis in patients with lung adenocarcinoma. Clinical decision-making and therapeutic customization may benefit from these results, which may serve as a valuable reference in the future.Copyright © 2022 Chang Liu et al.

基金:
语种:
PubmedID:
中科院(CAS)分区:
出版当年[2022]版:
大类 | 3 区 医学
小类 | 4 区 肿瘤学
最新[2025]版:
第一作者:
第一作者机构: [1]Thoracic Surgery, Yan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming 650000, Yunnan Province, China. [2]Key Laboratory of Tumor Immunological Prevention and Treatment of Yunnan Province, Yan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming 650000, Yunnan Province, China.
通讯作者:
通讯机构: [1]Thoracic Surgery, Yan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming 650000, Yunnan Province, China. [2]Key Laboratory of Tumor Immunological Prevention and Treatment of Yunnan Province, Yan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming 650000, Yunnan Province, China.
推荐引用方式(GB/T 7714):
APA:
MLA:

资源点击量:87472 今日访问量:0 总访问量:721 更新日期:2025-04-01 建议使用谷歌、火狐浏览器 常见问题

版权所有©2020 云南省第一人民医院 技术支持:重庆聚合科技有限公司 地址:云南省昆明市西山区金碧路157号