机构:[1]Kunming Med Univ, Yunnan Canc Hosp, Dept Clin Lab, Affiliated Hosp 3, Kunming 650106, Yunnan, Peoples R China[2]Shenzhen GenDo Med Technol Co Ltd, Res & Dev Unit, Dapeng 518000, Shenzhen, Peoples R China[3]Qujing Med Coll, Qujing 655000, Yunnan, Peoples R China[4]HKSTP, SDIVF R&D Ctr, 209,12W, Hong Kong, Peoples R China[5]Qujing First Peoples Hosp, Dept Sports Med, Yunnan 650500, Peoples R China[6]Chinese Univ Hong Kong, Sch Biomed Sci, CUHK SDU Joint Lab Reprod Genet, Hong Kong, Peoples R China[7]Kunming Med Univ, Yunnan Mol Diagnost Ctr, Dept Clin Lab, Yunnan Canc Hosp,Affiliated Hosp 2, Kunming 650500, Yunnan, Peoples R China
Uterine Corpus Endometrial Carcinoma (UCEC) is one of the major malignant tumors of the female reproductive system. However, there are limitations in the currently available diagnostic approaches for UCEC. Long non-coding RNAs (lncRNAs) play important roles in regulating biological processes as competitive endogenous RNA (ceRNA) in tumors. To study the potential of lncRNAs as non-invasive diagnostic tumor markers, RNA-sequencing dataset of UCEC patients from The Cancer Genome Atlas was used to identify differentially expressed genes. A lncRNA-miRNA-mRNA ceRNA network was constructed by differentially expressed lncRNAs, miRNAs and miRNAs. Pathway enrichment and functional analysis for the mRNAs in the constructed ceRNA network provide the direction of future research for UCEC by demonstrating the most affected processes and pathways. Seven potential lncRNA biomarkers (C20orf56, LOC100144604, LOC100190940, LOC151534, LOC727677, FLJ35390, LOC158572) were validated in UCEC patients by quantitative real-time PCR. Notably, LOC100190940 and LOC158572 were identified as novel RNA molecules with unknown functions. Receiver operating characteristic (ROC) curve analysis demonstrated that the combined 7 lncRNAs had a high diagnostic value for UCEC patients with area under curve (AUC) of 0.941 (95% CI: 0.875-0.947). Our study highlights the potential of the validated 7 lncRNAs panel as diagnostic biomarkers in UCEC, providing new insights into the UCEC pathogenesis.
基金:
Scientific Research Fund of Department of Yunnan Education [2021J0266]; Special Funds for Science Technology Innovation and Industrial Development of Shenzhen Dapeng New District [KJYF202001-21]; Shenzhen Science and Technology Program [SGDX20211123141201002]
第一作者机构:[1]Kunming Med Univ, Yunnan Canc Hosp, Dept Clin Lab, Affiliated Hosp 3, Kunming 650106, Yunnan, Peoples R China
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通讯作者:
推荐引用方式(GB/T 7714):
Wang Liangxiao,Su Xianwei,Wang Liangyu,et al.Identification of lncRNAs associated with uterine corpus endometrial cancer prognosis based on the competing endogenous RNA network[J].INTERNATIONAL JOURNAL OF MEDICAL SCIENCES.2023,20(12):1600-1615.doi:10.7150/ijms.87430.
APA:
Wang, Liangxiao,Su, Xianwei,Wang, Liangyu,Luo, Jianbo,Xiong, Zhiqiang...&Wang, Yuming.(2023).Identification of lncRNAs associated with uterine corpus endometrial cancer prognosis based on the competing endogenous RNA network.INTERNATIONAL JOURNAL OF MEDICAL SCIENCES,20,(12)
MLA:
Wang, Liangxiao,et al."Identification of lncRNAs associated with uterine corpus endometrial cancer prognosis based on the competing endogenous RNA network".INTERNATIONAL JOURNAL OF MEDICAL SCIENCES 20..12(2023):1600-1615